MA_28390g0010


Description : (at4g02750 : 633.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 148.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1266.0) & (original description: no original description)


Gene families : OG_42_0022310 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_28390g0010
Cluster HCCA clusters: Cluster_199


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 364 397
IPR002885 Pentatricopeptide_repeat 590 637
IPR002885 Pentatricopeptide_repeat 233 280
IPR002885 Pentatricopeptide_repeat 132 178
IPR002885 Pentatricopeptide_repeat 489 536
IPR032867 DYW_dom 763 887
IPR002885 Pentatricopeptide_repeat 399 428
IPR002885 Pentatricopeptide_repeat 307 330
IPR002885 Pentatricopeptide_repeat 429 459
IPR002885 Pentatricopeptide_repeat 664 688
IPR002885 Pentatricopeptide_repeat 337 363
No external refs found!