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  5. MA_2873g0010

MA_2873g0010


Description : (at1g10550 : 314.0) Encodes a membrane-localized protein that is predicted to function during cell wall modification.Overexpression of XTH33 results in abnormal cell morphology. It's expression is under epigenetic control by ATX1.; xyloglucan:xyloglucosyl transferase 33 (XTH33); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth; LOCATED IN: integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2022 Blast hits to 2008 proteins in 287 species: Archae - 0; Bacteria - 257; Metazoa - 0; Fungi - 351; Plants - 1343; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (p93349|xth_tobac : 226.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 628.0) & (original description: no original description)


Gene families : OG_42_0000965 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_2873g0010
Cluster HCCA clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G208300 No alias xyloglucan endotransglucosylase/hydrolase 30 0.01 Orthogroups_2024-Update
HORVU5Hr1G123920.1 No alias EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Pp1s74_19V6 No alias F3C3.5; xyloglucan:xyloglucosyl transferase, putative /... 0.02 Orthogroups_2024-Update
Sobic.002G194500.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Sobic.004G273200.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc04g008210 No alias ETAG-A3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000757 GH16 49 231
IPR010713 XET_C 275 311
No external refs found!