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  5. MA_28961g0010

MA_28961g0010


Description : (at1g11250 : 290.0) member of SYP12 Gene Family; syntaxin of plants 125 (SYP125); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 124 (TAIR:AT1G61290.1); Has 2564 Blast hits to 2556 proteins in 299 species: Archae - 11; Bacteria - 67; Metazoa - 1171; Fungi - 457; Plants - 455; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_28961g0010
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
151097 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
443146 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
74098 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
93442 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
At3g52400 No alias Syntaxin-122 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVC2] 0.03 Orthogroups_2024-Update
Brara.E03504.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
HORVU2Hr1G043130.15 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Seita.9G063400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.06 Orthogroups_2024-Update
Sobic.001G064900.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.06 Orthogroups_2024-Update
Solyc01g006950 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 243 293
IPR006011 Syntaxin_N 36 240
No external refs found!