1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_29814g0010

MA_29814g0010


Description : (at4g13710 : 122.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G24230.1). & (p40973|pel_lillo : 90.9) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 244.0) & (original description: no original description)


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_29814g0010
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Pp1s84_82V6 No alias pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!