MA_328340g0010

Description : (at4g03210 : 285.0) encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.; xyloglucan endotransglucosylase/hydrolase 9 (XTH9); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 5 (TAIR:AT5G13870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39857|xth_soybn : 247.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 570.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_328340g0010
Cluster	HCCA clusters: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
A4A49_19342	No alias	xyloglucan endotransglucosylasehydrolase 2	0.03	Orthogroups_2024-Update
AC210669.3_FG001	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.03	Orthogroups_2024-Update
Bradi1g27867	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.03	Orthogroups_2024-Update
Bradi1g33827	No alias	xyloglucan endotransglycosylase 6	0.05	Orthogroups_2024-Update
Brara.C02767.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
GRMZM2G128876	No alias	xyloglucan endotransglucosylase/hydrolase 25	0.02	Orthogroups_2024-Update
Glyma.01G196800	No alias	xyloglucan endotransglucosylase/hydrolase 6	0.03	Orthogroups_2024-Update
Glyma.12G080100	No alias	xyloglucan endotransglucosylase/hydrolase 32	0.03	Orthogroups_2024-Update
LOC_Os03g01800	No alias	glycosyl hydrolases family 16, putative, expressed	0.02	Orthogroups_2024-Update
MA_10434153g0020	No alias	(q41638\|xtha_phaan : 378.0) Xyloglucan...	0.04	Orthogroups_2024-Update
MA_11511g0010	No alias	(at2g36870 : 354.0) xyloglucan...	0.07	Orthogroups_2024-Update
PSME_00001209-RA	No alias	(at4g03210 : 309.0) encodes a member of xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00011813-RA	No alias	(at5g57560 : 322.0) Encodes a cell wall-modifying...	0.04	Orthogroups_2024-Update
PSME_00016554-RA	No alias	(at2g36870 : 288.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00022622-RA	No alias	(q41638\|xtha_phaan : 479.0) Xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00022999-RA	No alias	(at5g57530 : 289.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00023359-RA	No alias	(at5g13870 : 301.0) EXGT-A4, endoxyloglucan...	0.04	Orthogroups_2024-Update
PSME_00023360-RA	No alias	(p35694\|bru1_soybn : 312.0) Brassinosteroid-regulated...	0.04	Orthogroups_2024-Update
PSME_00025833-RA	No alias	(at5g65730 : 294.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00033177-RA	No alias	(at4g25810 : 347.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00035710-RA	No alias	(at2g36870 : 291.0) xyloglucan...	0.05	Orthogroups_2024-Update
PSME_00043401-RA	No alias	(at5g13870 : 171.0) EXGT-A4, endoxyloglucan...	0.03	Orthogroups_2024-Update
PSME_00045375-RA	No alias	(p93349\|xth_tobac : 273.0) Probable xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00047371-RA	No alias	(p35694\|bru1_soybn : 289.0) Brassinosteroid-regulated...	0.05	Orthogroups_2024-Update
PSME_00047378-RA	No alias	(at4g25810 : 342.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00048668-RA	No alias	(p35694\|bru1_soybn : 266.0) Brassinosteroid-regulated...	0.05	Orthogroups_2024-Update
PSME_00055766-RA	No alias	(q8lnz5\|xthb_phaan : 137.0) Probable xyloglucan...	0.03	Orthogroups_2024-Update
Potri.005G201200	No alias	xyloglucan endotransglucosylase/hydrolase 15	0.02	Orthogroups_2024-Update
Potri.018G095100	No alias	xyloglucan endotransglycosylase 6	0.05	Orthogroups_2024-Update
Solyc03g093080	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc03g093110	No alias	xyloglucan endotransglucosylase-hydrolase	0.07	Orthogroups_2024-Update
Solyc03g093120	No alias	xyloglucan endotransglucosylase-hydrolase	0.03	Orthogroups_2024-Update
Solyc03g093130	No alias	xyloglucan endotransglucosylase-hydrolase 3	0.03	Orthogroups_2024-Update
Solyc03g098430	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g046290	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc07g055990	No alias	Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1...	0.04	Orthogroups_2024-Update
Solyc11g065600	No alias	xyloglucan endotransglucosylase-hydrolase 4	0.02	Orthogroups_2024-Update
Sopen03g023920	No alias	Glycosyl hydrolases family 16	0.03	Orthogroups_2024-Update
Sopen07g026530	No alias	Glycosyl hydrolases family 16	0.02	Orthogroups_2024-Update
Sopen07g029350	No alias	Glycosyl hydrolases family 16	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044255	cellular lipid metabolic process	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000757	GH16	29	219
IPR010713	XET_C	249	296

External Links

No external refs found!

MA_328340g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation