MA_334413g0010


Description : (at2g32540 : 177.0) encodes a gene similar to cellulose synthase; cellulose synthase-like B4 (CSLB04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2375 Blast hits to 2288 proteins in 474 species: Archae - 7; Bacteria - 756; Metazoa - 0; Fungi - 5; Plants - 1590; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)


Gene families : OG_42_0000860 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_334413g0010
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
At4g24010 No alias Glycosyltransferase (Fragment)... 0.03 Orthogroups_2024-Update
Brara.A01403.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H00025.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G014558 No alias cellulose synthase like E1 0.02 Orthogroups_2024-Update
Glyma.08G330600 No alias cellulose synthase like E1 0.03 Orthogroups_2024-Update
Glyma.14G012800 No alias cellulose synthase like E1 0.06 Orthogroups_2024-Update
PSME_00000316-RA No alias (at1g55850 : 587.0) encodes a protein similar to... 0.04 Orthogroups_2024-Update
PSME_00004860-RA No alias (at1g55850 : 582.0) encodes a protein similar to... 0.03 Orthogroups_2024-Update
PSME_00019378-RA No alias (at1g55850 : 525.0) encodes a protein similar to... 0.04 Orthogroups_2024-Update
PSME_00021120-RA No alias (at1g55850 : 589.0) encodes a protein similar to... 0.04 Orthogroups_2024-Update
PSME_00038788-RA No alias (at1g55850 : 582.0) encodes a protein similar to... 0.04 Orthogroups_2024-Update
Solyc03g005450 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0AUE4_POPTO) 0.03 Orthogroups_2024-Update
Solyc07g065660 No alias Cellulose synthase family protein (AHRD V3.3 *** B9GFY5_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA InterProScan predictions
BP GO:0030244 cellulose biosynthetic process IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 94 219
No external refs found!