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  5. MA_3390g0010

MA_3390g0010


Description : (at3g22230 : 216.0) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e, conserved site (InterPro:IPR018262), Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT4G15000.1); Has 765 Blast hits to 765 proteins in 292 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 149; Plants - 139; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (q05462|rl27_pea : 209.0) 60S ribosomal protein L27 - Pisum sativum (Garden pea) & (reliability: 432.0) & (original description: no original description)


Gene families : OG_42_0001324 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_3390g0010
Cluster HCCA clusters: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
166700 No alias Ribosomal L27e protein family 0.03 Orthogroups_2024-Update
Brara.A02020.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.A02735.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.H00790.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
GRMZM2G016250 No alias Ribosomal L27e protein family 0.03 Orthogroups_2024-Update
GRMZM2G326066 No alias Ribosomal L27e protein family 0.03 Orthogroups_2024-Update
HORVU7Hr1G063280.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os02g18380 No alias 60S ribosomal protein L27-3, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.006G221200.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
evm.model.contig_2045.6 No alias (p41101|rl27_soltu : 144.0) 60S ribosomal protein L27 -... 0.02 Orthogroups_2024-Update
evm.model.tig00021275.23 No alias (at3g22230 : 163.0) Ribosomal L27e protein family;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 52 134
No external refs found!