- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at2g22070 : 525.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 111.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 970.0) & (original description: no original description)
Gene families : OG_42_0011853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011853_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_370961g0010 | |
| Cluster | HCCA clusters: Cluster_234 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0005319 | lipid transporter activity | IEP | Predicted GO |
| MF | GO:0005548 | phospholipid transporter activity | IEP | Predicted GO |
| BP | GO:0006820 | anion transport | IEP | Predicted GO |
| BP | GO:0006869 | lipid transport | IEP | Predicted GO |
| BP | GO:0007050 | cell cycle arrest | IEP | Predicted GO |
| MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
| BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
| BP | GO:0015748 | organophosphate ester transport | IEP | Predicted GO |
| BP | GO:0015914 | phospholipid transport | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| MF | GO:0019210 | kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
| MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 274 | 322 |
| IPR002885 | Pentatricopeptide_repeat | 142 | 188 |
| IPR002885 | Pentatricopeptide_repeat | 375 | 422 |
| IPR002885 | Pentatricopeptide_repeat | 449 | 473 |
| IPR002885 | Pentatricopeptide_repeat | 217 | 241 |
| IPR002885 | Pentatricopeptide_repeat | 245 | 270 |
| IPR032867 | DYW_dom | 586 | 688 |
| No external refs found! |