MA_3951g0010

Description : (at1g69780 : 143.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description)

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_3951g0010
Cluster	HCCA clusters: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
19476	No alias	homeobox 1	0.02	Orthogroups_2024-Update
A4A49_10256	No alias	homeobox-leucine zipper protein hat5	0.03	Orthogroups_2024-Update
A4A49_14998	No alias	homeobox-leucine zipper protein hat7	0.03	Orthogroups_2024-Update
Bradi1g71930	No alias	homeobox 3	0.02	Orthogroups_2024-Update
Bradi1g73190	No alias	Homeobox-leucine zipper protein family	0.03	Orthogroups_2024-Update
Bradi3g35850	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Brara.E03658.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G01237.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.02G022300	No alias	homeobox 1	0.03	Orthogroups_2024-Update
Glyma.05G030000	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Glyma.11G242200	No alias	homeobox protein 6	0.04	Orthogroups_2024-Update
LOC_Os09g35910	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00014389-RA	No alias	(at1g69780 : 146.0) Encodes a homeodomain leucine zipper...	0.05	Orthogroups_2024-Update
PSME_00014391-RA	No alias	(at1g69780 : 134.0) Encodes a homeodomain leucine zipper...	0.04	Orthogroups_2024-Update
Potri.011G114500	No alias	homeobox protein 52	0.05	Orthogroups_2024-Update
Pp1s28_54V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.02	Orthogroups_2024-Update
Pp1s57_194V6	No alias	No description available	0.02	Orthogroups_2024-Update
Solyc03g082550	No alias	Homeobox leucine zipper (AHRD V3.3 - J7FWS7_ROSRU)	0.03	Orthogroups_2024-Update
Sopen06g018290	No alias	Homeobox domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
BP	GO:0009892	negative regulation of metabolic process	IEP	Predicted GO
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010629	negative regulation of gene expression	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	93	146
IPR003106	Leu_zip_homeo	148	189

External Links

No external refs found!

MA_3951g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation