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  5. MA_4130g0010

MA_4130g0010


Description : (at3g57670 : 349.0) NO TRANSMITTING TRACT (NTT); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: WIP domain protein 4 (TAIR:AT3G20880.1); Has 16303 Blast hits to 11155 proteins in 263 species: Archae - 2; Bacteria - 36; Metazoa - 14565; Fungi - 231; Plants - 853; Viruses - 60; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 698.0) & (original description: no original description)


Gene families : OG_42_0000614 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_4130g0010
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G095100 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.12G237800 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Sobic.003G363200.1 No alias C2H2 subclass WIP transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 264 283
No external refs found!