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  5. MA_413510g0010

MA_413510g0010


Description : (at1g09155 : 172.0) phloem protein 2-B15 (PP2-B15); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: phloem protein 2-B13 (TAIR:AT1G56240.1); Has 535 Blast hits to 526 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 535; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_413510g0010
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
A4A49_34028 No alias f-box protein pp2-b15 0.03 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.14G073300 No alias phloem protein 2-B10 0.03 Orthogroups_2024-Update
HORVU7Hr1G012610.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_227118g0010 No alias (at2g02340 : 82.4) phloem protein 2-B8 (PP2-B8);... 0.03 Orthogroups_2024-Update
MA_956503g0010 No alias (at2g02240 : 167.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
PSME_00025236-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00050854-RA No alias (at2g02240 : 154.0) maternal effect embryo arrest 66... 0.04 Orthogroups_2024-Update
Potri.005G022100 No alias F-box family protein 0.02 Orthogroups_2024-Update
Potri.013G012600 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
Potri.018G016000 No alias phloem protein 2-B2 0.03 Orthogroups_2024-Update
Sobic.001G375400.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g043510 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 42 82
IPR025886 PP2-like 134 294
No external refs found!