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  5. MA_41514g0010

MA_41514g0010


Description : (at5g01880 : 91.3) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_41514g0010
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
96631 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_36993 No alias ring-h2 finger protein atl52 0.02 Orthogroups_2024-Update
At1g49210 No alias E3 ubiquitin-protein ligase ATL76... 0.01 Orthogroups_2024-Update
Bradi5g19490 No alias RING-H2 finger A3A 0.02 Orthogroups_2024-Update
Brara.A03044.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.G02364.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Cre11.g476250 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.01 Orthogroups_2024-Update
Glyma.07G078800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G214600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G028280.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU4Hr1G004390.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G016710.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os01g11460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g33720 No alias RING-H2 finger protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_10244600g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_107765g0010 No alias (at1g72200 : 140.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_226198g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_81046g0010 No alias (at1g49230 : 127.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00003015-RA No alias (at3g05200 : 122.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
PSME_00022170-RA No alias (at1g53820 : 134.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.010G206200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G206300 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.014G043200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G023500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.8G248200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.9G341100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G339400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G114200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G110200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g088450 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G53820.1) 0.02 Orthogroups_2024-Update
Solyc01g100100 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc11g005320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.02 Orthogroups_2024-Update
Sopen11g001300 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g002340 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 145 188
No external refs found!