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  5. MA_41870g0020

MA_41870g0020


Description : (at4g29040 : 240.0) 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,; regulatory particle AAA-ATPase 2A (RPT2a); FUNCTIONS IN: ATPase activity; INVOLVED IN: in 17 processes; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G20140.1); Has 31112 Blast hits to 28760 proteins in 3112 species: Archae - 1431; Bacteria - 10308; Metazoa - 4877; Fungi - 3744; Plants - 3214; Viruses - 41; Other Eukaryotes - 7497 (source: NCBI BLink). & (p46466|prs4_orysa : 223.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (reliability: 480.0) & (original description: no original description)


Gene families : OG_42_0015666 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0015666_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_41870g0020
Cluster HCCA clusters: Cluster_121


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 113 159
No external refs found!