Description : (at4g11050 : 801.0) glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q5nat0|gun2_orysa : 733.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (reliability: 1602.0) & (original description: no original description)
Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_42717g0010 | |
Cluster | HCCA clusters: Cluster_39 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
144066 | No alias | glycosyl hydrolase 9B7 | 0.03 | Orthogroups_2024-Update | |
77612 | No alias | glycosyl hydrolase 9B5 | 0.03 | Orthogroups_2024-Update | |
99802 | No alias | glycosyl hydrolase 9C2 | 0.02 | Orthogroups_2024-Update | |
A4A49_05097 | No alias | endoglucanase 11 | 0.02 | Orthogroups_2024-Update | |
A4A49_16190 | No alias | endoglucanase | 0.03 | Orthogroups_2024-Update | |
At1g19940 | No alias | Endoglucanase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI9] | 0.02 | Orthogroups_2024-Update | |
At1g64390 | No alias | Endoglucanase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q42059] | 0.03 | Orthogroups_2024-Update | |
At3g43860 | No alias | Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3] | 0.03 | Orthogroups_2024-Update | |
Bradi4g36240 | No alias | glycosyl hydrolase 9B7 | 0.03 | Orthogroups_2024-Update | |
Brara.B02600.1 | No alias | class-B endo-1,4-beta-glucanase | 0.03 | Orthogroups_2024-Update | |
Glyma.02G269400 | No alias | glycosyl hydrolase 9B8 | 0.02 | Orthogroups_2024-Update | |
Glyma.12G027200 | No alias | glycosyl hydrolase 9C1 | 0.03 | Orthogroups_2024-Update | |
Glyma.18G030700 | No alias | cellulase 2 | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g21070 | No alias | endoglucanase, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g50040 | No alias | endoglucanase, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10430521g0010 | No alias | (at3g43860 : 535.0) glycosyl hydrolase 9A4 (GH9A4);... | 0.03 | Orthogroups_2024-Update | |
Mp1g20540.1 | No alias | Endoglucanase 19 OS=Arabidopsis thaliana... | 0.02 | Orthogroups_2024-Update | |
Mp8g17860.1 | No alias | Endoglucanase 3 OS=Oryza sativa subsp. japonica... | 0.02 | Orthogroups_2024-Update | |
PSME_00008851-RA | No alias | (at1g64390 : 781.0) glycosyl hydrolase 9C2 (GH9C2);... | 0.05 | Orthogroups_2024-Update | |
PSME_00016234-RA | No alias | (at1g70710 : 674.0) endo-1,4-beta-glucanase. Involved in... | 0.03 | Orthogroups_2024-Update | |
PSME_00029529-RA | No alias | (at1g64390 : 682.0) glycosyl hydrolase 9C2 (GH9C2);... | 0.03 | Orthogroups_2024-Update | |
Potri.001G092200 | No alias | glycosyl hydrolase 9C2 | 0.03 | Orthogroups_2024-Update | |
Potri.002G225200 | No alias | glycosyl hydrolase 9B8 | 0.04 | Orthogroups_2024-Update | |
Potri.003G139600 | No alias | glycosyl hydrolase 9C2 | 0.04 | Orthogroups_2024-Update | |
Potri.005G115400 | No alias | glycosyl hydrolase 9B5 | 0.03 | Orthogroups_2024-Update | |
Potri.008G132700 | No alias | glycosyl hydrolase 9B1 | 0.04 | Orthogroups_2024-Update | |
Potri.014G126900 | No alias | glycosyl hydrolase 9B13 | 0.04 | Orthogroups_2024-Update | |
Pp1s149_10V6 | No alias | endo-beta- -glucanase | 0.03 | Orthogroups_2024-Update | |
Pp1s19_105V6 | No alias | endo-beta- -glucanase | 0.02 | Orthogroups_2024-Update | |
Pp1s376_19V6 | No alias | endo-beta- -glucanase | 0.03 | Orthogroups_2024-Update | |
Pp1s37_355V6 | No alias | endo-beta- -glucanase | 0.03 | Orthogroups_2024-Update | |
Solyc07g049300 | No alias | Endoglucanase (AHRD V3.3 *** M0ZJ27_SOLTU) | 0.03 | Orthogroups_2024-Update | |
Solyc07g064870 | No alias | Endoglucanase (AHRD V3.3 *** M1C0J8_SOLTU) | 0.03 | Orthogroups_2024-Update | |
Sopen08g030520 | No alias | Glycosyl hydrolase family 9 | 0.02 | Orthogroups_2024-Update | |
Sopen08g031400 | No alias | Glycosyl hydrolase family 9 | 0.03 | Orthogroups_2024-Update | |
Sopen09g004950 | No alias | Glycosyl hydrolase family 9 | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
MF | GO:0030246 | carbohydrate binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005576 | extracellular region | IEP | Predicted GO |
CC | GO:0005618 | cell wall | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0006333 | chromatin assembly or disassembly | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006996 | organelle organization | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
CC | GO:0030312 | external encapsulating structure | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0042623 | ATPase activity, coupled | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
CC | GO:0048046 | apoplast | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
No external refs found! |