Description : PHD finger alfin-like protein (AHRD V3.3 *** A0A072UGM4_MEDTR)
Gene families : OG_42_0000222 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000222_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc10g076690 | |
Cluster | HCCA clusters: Cluster_118 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g20510 | No alias | PHD finger protein ALFIN-LIKE 5... | 0.02 | Orthogroups_2024-Update | |
Glyma.13G107700 | No alias | alfin-like 5 | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g07040 | No alias | PHD finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00033632-RA | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
Sobic.002G371000.1 | No alias | methylation reader Alfin of PRC1 complex | 0.03 | Orthogroups_2024-Update | |
Sobic.008G073600.2 | No alias | methylation reader Alfin of PRC1 complex | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00021357.26 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0042393 | histone binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
MF | GO:0016829 | lyase activity | IEP | Predicted GO |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
No external refs found! |