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  5. MA_458668g0010

MA_458668g0010


Description : (at2g45660 : 100.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 99.8) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (reliability: 185.6) & (original description: no original description)


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_458668g0010
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_14235 No alias developmental protein sepallata 1 0.05 Orthogroups_2024-Update
A4A49_14828 No alias agamous-like mads-box protein agl104 0.03 Orthogroups_2024-Update
A4A49_18078 No alias developmental protein sepallata 1 0.02 Orthogroups_2024-Update
A4A49_18989 No alias agamous-like mads-box protein agl19 0.04 Orthogroups_2024-Update
A4A49_19521 No alias developmental protein sepallata 1 0.05 Orthogroups_2024-Update
A4A49_23146 No alias mads-box transcription factor 6 0.02 Orthogroups_2024-Update
At1g22130 No alias Agamous-like MADS-box protein AGL104... 0.03 Orthogroups_2024-Update
At2g03710 No alias Agamous-like MADS-box protein AGL3... 0.03 Orthogroups_2024-Update
At2g42830 No alias K-box region and MADS-box transcription factor family... 0.04 Orthogroups_2024-Update
At4g09960 No alias K-box region and MADS-box transcription factor family... 0.02 Orthogroups_2024-Update
Bradi2g30530 No alias AGAMOUS-like 23 0.02 Orthogroups_2024-Update
Bradi2g38695 No alias MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi4g39420 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Brara.I02103.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.04 Orthogroups_2024-Update
Brara.I02486.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00360.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K01743.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G064100 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.06G117600 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.07G081300 No alias AGAMOUS-like 6 0.03 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.04 Orthogroups_2024-Update
Glyma.09G283800 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.13G052100 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
Glyma.13G052700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.17G081200 No alias AGAMOUS-like 8 0.05 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
HORVU7Hr1G081070.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G081190.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g34940 No alias OsMADS4 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g45650 No alias OsMADS30 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
PSME_00013164-RA No alias (at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all... 0.03 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.04 Orthogroups_2024-Update
Potri.003G119700 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Potri.004G130900 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.005G182200 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Seita.4G093200.1 No alias MADS/AGL-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.007G192900.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G142500.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
Sopen02g033990 No alias SRF-type transcription factor (DNA-binding and... 0.03 Orthogroups_2024-Update
Sopen06g023350 No alias K-box region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!