Heatmap: Cluster_2 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	1 h after light	3 h after light	5 h after light	7 h after light	9 h after light	11 h after light	13 h after light	15 h after light	1 h after dark	3 h after dark	5 h after dark	7 h after dark
MA_10029964g0010	-	-	2.56	-	-	-	1.45	-	-	1.75	-	-
MA_10045883g0010	-0.41	-	2.19	-	-	-	-0.24	1.87	-	0.06	0.18	-
MA_100577g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_10126826g0010	-	1.3	1.46	-	-	-	-	-	-	1.24	2.15	-
MA_10175930g0010	1.01	-	2.46	-	-	-	-	-	2.16	-	-	-
MA_10264343g0010	-0.48	-	2.06	-	1.57	-	-	1.64	-	-	0.05	-
MA_10276660g0010	-1.08	-0.99	1.17	-0.66	1.22	-1.76	-1.02	-0.13	-1.91	-0.87	0.89	0.52
MA_10286643g0010	-	-	3.04	-	-	-	1.93	-	-	-	-	-
MA_10428260g0010	-1.03	0.22	1.57	-	-	0.32	-0.93	-	-	-	2.49	-
MA_10428282g0010	-	0.47	2.85	-0.97	-	-	1.18	-0.69	-	-	-	-
MA_10428346g0010	-	-0.41	1.94	0.61	-	-0.31	2.34	-	-	-	-	-
MA_10431385g0010	-0.35	0.07	0.39	0.23	0.51	-0.63	-0.45	-0.22	-0.23	-0.36	0.21	0.3
MA_10432070g0010	-	-	2.69	1.36	1.57	-	-	-	-	-	-	-
MA_10433257g0010	-1.05	-0.55	0.57	0.2	0.27	-0.02	-0.51	-0.62	-0.19	0.07	0.9	-0.21
MA_10434540g0020	-	-	2.68	-	-	-	2.49	-	-	-	-	-
MA_10434778g0020	0.64	-	2.15	-	-	-	1.2	-	0.84	-	-	0.95
MA_106360g0010	-	-	2.69	-	-	-	-	1.45	1.5	-	-	-
MA_1139643g0020	1.87	-	3.06	-	-	-	-	-	-	-	-	-
MA_15013g0010	1.26	1.31	-	-	-	-	-	-	-	-	2.17	1.39
MA_151301g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_15468g0010	-1.04	-1.61	1.09	0.37	-0.39	0.34	-0.92	0.24	-0.04	0.22	0.29	-0.61
MA_162652g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_165401g0010	1.04	-	2.85	-	1.46	-	-	-	-	-	-	-
MA_180180g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_19342g0010	-0.99	0.98	0.3	-0.34	0.16	-0.01	-0.52	-0.1	-0.79	0.05	0.31	-0.13
MA_200348g0010	-1.06	0.26	0.53	0.03	0.13	0.08	-0.37	-0.36	-0.17	-0.0	0.56	-0.32
MA_205874g0010	-	-	2.91	1.31	-	-	-	-	-	-	1.01	-
MA_221187g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_25764g0010	2.47	-	2.69	-	-	-	-	-	-	-	-	-
MA_275122g0010	-	-	2.73	-	-	-	-	-	-	-	2.42	-
MA_278449g0010	-	-	3.23	-	-	-	-	1.4	-	-	-	-
MA_28694g0010	-	2.61	1.71	-	-	-	-	-	-	-	1.4	-
MA_295849g0010	-	-	2.2	-	-	-	-	-	-	-	2.89	-
MA_304675g0010	0.19	-0.66	1.27	-	-	-0.45	0.61	-1.92	-0.36	-1.18	1.03	1.02
MA_304712g0020	-	-	2.84	-	-	-	-	-	-	0.62	0.54	0.87
MA_309953g0010	-	-	2.44	-	-	-	2.72	-	-	-	-	-
MA_316222g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_376653g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_376763g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_458668g0010	-	-	3.23	-	-	1.39	-	-	-	-	-	-
MA_4635334g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_473077g0010	1.73	-	2.02	-	-	-	-	-	-	2.21	-	-
MA_4873g0010	0.17	-0.02	0.02	-0.34	-0.42	-0.02	0.17	0.08	-0.16	-0.0	0.13	0.24
MA_50490g0010	1.8	-	3.09	-	-	-	-	-	-	-	-	-
MA_50527g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_51464g0010	0.47	-	1.69	-	-0.53	-0.24	0.97	0.45	-0.4	-	-	0.82
MA_51661g0010	-	-	2.49	-	-	-	-	-	-	2.68	-	-
MA_545504g0010	-	-	2.58	-	-	-	-	-	1.39	1.77	-	-
MA_55512g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_5558390g0010	-	-	3.01	1.99	-	-	-	-	-	-	-	-
MA_559848g0010	-0.85	-0.27	0.56	0.25	0.33	0.12	-0.6	-0.49	-0.19	-0.18	0.79	-0.42
MA_5781354g0010	-1.13	-0.14	0.59	0.12	0.21	-0.03	-0.51	-0.53	-0.08	0.18	0.66	-0.24
MA_58253g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_6348739g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_656652g0010	-	0.61	2.23	-	-1.16	-0.87	-	1.53	-	-	0.93	-
MA_67249g0010	-	-	2.73	-	0.75	-	0.86	-	-	-	-	0.88
MA_710181g0010	-1.13	0.05	2.07	-0.59	-	0.28	-0.06	0.85	-	-	-	0.73
MA_72170g0010	-	-	3.15	-	1.64	-	-	-	-	-	-	-
MA_73124g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_749769g0010	-	-	2.68	-	-	-	2.49	-	-	-	-	-
MA_76252g0020	-	-	2.06	-	-	-	-	2.06	1.88	-	-	-
MA_7962954g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_8074461g0010	-	-	3.22	-	-	-	-	-	-	1.41	-	-
MA_8087576g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_83056g0020	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_84752g0010	-	-	3.44	-	-	-	-	-	0.2	-	-	-
MA_8574268g0010	-	-	2.7	-	-	-	-	2.46	-	-	-	-
MA_85860g0010	-	-	1.53	-	-	-	1.43	0.8	-	-	2.23	-
MA_86183g0010	-	2.04	-	-	0.99	-	-	-	-	-	1.9	1.12
MA_86776g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_8892417g0010	-0.79	-0.05	0.57	0.27	0.37	-0.18	-0.59	-0.37	-0.12	-0.28	0.61	-0.19
MA_8997906g0010	-1.07	0.09	0.62	0.28	0.45	0.02	-0.57	-0.5	-0.22	-0.15	0.6	-0.54
MA_90121g0010	0.29	-1.51	1.52	0.91	-	-0.28	-	-1.71	0.93	-	0.93	-0.44
MA_9013514g0010	-	1.02	1.47	-0.55	-0.29	-	-	1.82	-	-0.41	-0.84	-0.2
MA_90151g0010	-	-	2.7	-	-	-	-	2.46	-	-	-	-
MA_9060799g0010	-	1.99	2.15	-	-	-	-	-	-	-	1.84	-
MA_9177353g0010	-	-	1.56	-	-	-	-	-	-	-	2.6	1.59
MA_93044g0010	2.47	-	2.69	-	-	-	-	-	-	-	-	-
MA_9362585g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_938669g0010	-0.07	-0.14	0.42	-0.26	-0.19	0.09	0.14	-0.27	-0.55	-0.4	0.42	0.38
MA_946997g0010	-	-	2.47	0.51	-1.43	-0.12	-1.41	-0.08	-1.31	-	-	1.02
MA_9495805g0010	-0.12	0.04	0.4	-0.06	-0.21	-0.1	-0.14	-0.05	-0.16	-0.1	0.32	0.04
MA_951465g0010	1.28	0.82	2.3	-	-0.23	-	-	-	-	-	-	1.01
MA_96504g0010	-	-	2.96	-	-	-	-	-	-	-	2.08	-
MA_9752486g0010	0.44	-1.24	-1.15	-2.72	-	-1.51	-	0.28	0.28	1.05	1.79	0.38
MA_97537g0010	-	-	3.58	-	-	-	-	-	-	-	-	-
MA_9957327g0010	-	1.2	2.23	-	-	-	-	1.23	-	1.42	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.