1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_492535g0010

MA_492535g0010


Description : (at5g02190 : 245.0) encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage.; PROMOTION OF CELL SURVIVAL 1 (PCS1); CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G39710.1); Has 2066 Blast hits to 2053 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 96; Plants - 1822; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description)


Gene families : OG_42_0002988 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_492535g0010
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
A4A49_02387 No alias aspartic proteinase pcs1 0.03 Orthogroups_2024-Update
Bradi1g66770 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
MA_10427844g0010 No alias (at5g02190 : 360.0) encodes an aspartic protease, has an... 0.03 Orthogroups_2024-Update
Sobic.003G353500.1 No alias A1-class (Pepsin) protease & regulatory factor *(PCS1)... 0.03 Orthogroups_2024-Update
Solyc09g011040 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR032861 TAXi_N 122 235
IPR032799 TAXi_C 261 429
No external refs found!