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  5. MA_53373g0010

MA_53373g0010


Description : (at3g13540 : 224.0) Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).; myb domain protein 5 (MYB5); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 17 (TAIR:AT3G61250.1); Has 8972 Blast hits to 8275 proteins in 512 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 461; Plants - 5987; Viruses - 3; Other Eukaryotes - 1687 (source: NCBI BLink). & (p20025|myb38_maize : 210.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 448.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_53373g0010
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
A4A49_00243 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
A4A49_16262 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.04 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.04 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.03 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.03 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.06 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.04 Orthogroups_2024-Update
A4A49_41919 No alias myb-related protein myb4 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.03 Orthogroups_2024-Update
At3g11440 No alias Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5] 0.03 Orthogroups_2024-Update
At3g13540 No alias MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4] 0.05 Orthogroups_2024-Update
At3g28470 No alias Transcription factor MYB35... 0.04 Orthogroups_2024-Update
At3g53200 No alias Transcription factor MYB27... 0.03 Orthogroups_2024-Update
At3g61250 No alias Transcription factor MYB41... 0.02 Orthogroups_2024-Update
At4g13480 No alias Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9] 0.03 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.03 Orthogroups_2024-Update
Bradi2g04252 No alias myb domain protein 50 0.02 Orthogroups_2024-Update
Bradi2g48521 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03345.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.05 Orthogroups_2024-Update
Brara.C04622.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02266.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03164.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.H01124.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I02176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.05 Orthogroups_2024-Update
Cre02.g108350 No alias myb domain protein 1 0.02 Orthogroups_2024-Update
GRMZM2G005066 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
GRMZM2G051256 No alias myb domain protein 12 0.04 Orthogroups_2024-Update
GRMZM2G095904 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
GRMZM2G096358 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
GRMZM2G143046 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G158700 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G701063 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.06G103300 No alias myb domain protein 93 0.05 Orthogroups_2024-Update
Glyma.06G300200 No alias myb domain protein 14 0.04 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.08G031300 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Glyma.09G032100 No alias myb domain protein 78 0.03 Orthogroups_2024-Update
Glyma.09G206200 No alias myb domain protein 39 0.03 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
Glyma.10G006600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.10G273000 No alias myb domain protein 62 0.05 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.05 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.05 Orthogroups_2024-Update
Glyma.12G106400 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.12G199600 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.13G303200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.15G041100 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Glyma.15G144000 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.02 Orthogroups_2024-Update
Glyma.16G189400 No alias myb domain protein 18 0.03 Orthogroups_2024-Update
Glyma.17G031600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Glyma.19G055800 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Glyma.19G219000 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
HORVU4Hr1G052490.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.03 Orthogroups_2024-Update
LOC_Os01g19970 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g51260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g40530 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os06g10350 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15020 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g36250 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g03150 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
MA_101790g0010 No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_190973g0010 No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.04 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.05 Orthogroups_2024-Update
MA_8626g0010 No alias (at1g22640 : 166.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
MA_93127g0010 No alias (at4g38620 : 220.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.04 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.05 Orthogroups_2024-Update
PSME_00017439-RA No alias (at3g13540 : 222.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00019912-RA No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00042064-RA No alias (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.05 Orthogroups_2024-Update
PSME_00050855-RA No alias "(at2g47460 : 188.0) ""MYB12 belongs to subgroup 7 of... 0.04 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.05 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
PSME_00052620-RA No alias (at3g13540 : 220.0) Encodes a member of the MYB family... 0.06 Orthogroups_2024-Update
Potri.001G224500 No alias myb domain protein 65 0.04 Orthogroups_2024-Update
Potri.002G038500 No alias myb domain protein 14 0.02 Orthogroups_2024-Update
Potri.002G173900 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Potri.006G123400 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Potri.008G081600 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.010G114000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.012G140700 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.02 Orthogroups_2024-Update
Potri.015G041100 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Potri.019G036400 No alias myb domain protein 5 0.05 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Pp1s284_57V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.02 Orthogroups_2024-Update
Seita.1G250600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.04 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G055800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.05 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Seita.5G274200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.05 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G279100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G216900.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G217200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.008G055800.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G131400.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G148100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g005660 No alias R2R3MYB transcription factor 5 0.02 Orthogroups_2024-Update
Solyc02g082040 No alias R2R3MYB transcription factor 56 0.03 Orthogroups_2024-Update
Solyc02g089190 No alias R2R3MYB transcription factor 29 0.03 Orthogroups_2024-Update
Solyc02g091980 No alias blind-like7 0.03 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.03 Orthogroups_2024-Update
Solyc07g053230 No alias R2R3MYB transcription factor 83 0.03 Orthogroups_2024-Update
Solyc10g005460 No alias MYB transcription factor (AHRD V3.3 *** A0A0U3IU11_MESCR) 0.03 Orthogroups_2024-Update
Sopen02g033980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen02g038370 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen11g029710 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!