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  5. MA_58851g0010

MA_58851g0010


Description : (at3g10260 : 256.0) Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G61560.1); Has 1060 Blast hits to 1060 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 0; Plants - 458; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description)


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_58851g0010
Cluster HCCA clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
96839 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
A4A49_21447 No alias reticulon-like protein b8 0.03 Orthogroups_2024-Update
At3g10260 No alias Reticulon family protein [Source:TAIR;Acc:AT3G10260] 0.03 Orthogroups_2024-Update
Bradi2g14138 No alias Function unknown 0.03 Orthogroups_2024-Update
Cre16.g689087 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
GRMZM2G157629 No alias VIRB2-interacting protein 1 0.01 Orthogroups_2024-Update
LOC_Os03g56900 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g24770 No alias reticulon domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00033509-RA No alias (at3g10260 : 192.0) Reticulon family protein; CONTAINS... 0.03 Orthogroups_2024-Update
Potri.001G097700 No alias Reticulan like protein B3 0.02 Orthogroups_2024-Update
Potri.002G165400 No alias Reticulon family protein 0.04 Orthogroups_2024-Update
Seita.2G029000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Seita.5G383400.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Seita.7G086000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sopen08g030030 No alias Reticulon 0.02 Orthogroups_2024-Update
Sopen12g002240 No alias Reticulon 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 112 266
No external refs found!