Solyc01g096860

Description : AP2-like ethylene-responsive transcription factor (AHRD V3.3 *-* W9RR61_9ROSA)

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g096860
Cluster	HCCA clusters: Cluster_191

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10848	No alias	ethylene-responsive transcription factor rap2-7	0.03	Orthogroups_2024-Update
A4A49_19373	No alias	ethylene-responsive transcription factor rap2-7	0.04	Orthogroups_2024-Update
At1g16060	No alias	AP2-like ethylene-responsive transcription factor...	0.02	Orthogroups_2024-Update
At3g54320	No alias	Integrase-type DNA-binding superfamily protein...	0.02	Orthogroups_2024-Update
At5g67180	No alias	AP2-like ethylene-responsive transcription factor TOE3...	0.03	Orthogroups_2024-Update
Brara.J02916.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Cre01.g009650	No alias	AINTEGUMENTA-like 5	0.01	Orthogroups_2024-Update
Cre01.g023100	No alias	target of early activation tagged (EAT) 3	0.01	Orthogroups_2024-Update
Cre16.g667900	No alias	AINTEGUMENTA-like 5	0.01	Orthogroups_2024-Update
Glyma.13G096900	No alias	AINTEGUMENTA-like 5	0.04	Orthogroups_2024-Update
Glyma.17G170300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU5Hr1G112440.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
MA_121578g0010	No alias	(at4g37750 : 394.0) ANT is required for control of cell...	0.03	Orthogroups_2024-Update
Pp1s131_131V6	No alias	ap2 domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s66_282V6	No alias	ap2 erebp transcription factor	0.01	Orthogroups_2024-Update
Seita.2G024300.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
Seita.3G257700.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Predicted GO
MF	GO:0005351	carbohydrate:proton symporter activity	IEP	Predicted GO
MF	GO:0005402	carbohydrate:cation symporter activity	IEP	Predicted GO
BP	GO:0006259	DNA metabolic process	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006644	phospholipid metabolic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
MF	GO:0008318	protein prenyltransferase activity	IEP	Predicted GO
BP	GO:0008643	carbohydrate transport	IEP	Predicted GO
MF	GO:0008915	lipid-A-disaccharide synthase activity	IEP	Predicted GO
BP	GO:0009245	lipid A biosynthetic process	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015293	symporter activity	IEP	Predicted GO
MF	GO:0015294	solute:cation symporter activity	IEP	Predicted GO
MF	GO:0015295	solute:proton symporter activity	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
BP	GO:0018342	protein prenylation	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Predicted GO
CC	GO:0030131	clathrin adaptor complex	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO
BP	GO:0032957	inositol trisphosphate metabolic process	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0043647	inositol phosphate metabolic process	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046493	lipid A metabolic process	IEP	Predicted GO
MF	GO:0047325	inositol tetrakisphosphate 1-kinase activity	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
MF	GO:0051765	inositol tetrakisphosphate kinase activity	IEP	Predicted GO
MF	GO:0051766	inositol trisphosphate kinase activity	IEP	Predicted GO
MF	GO:0052725	inositol-1,3,4-trisphosphate 6-kinase activity	IEP	Predicted GO
MF	GO:0052726	inositol-1,3,4-trisphosphate 5-kinase activity	IEP	Predicted GO
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
BP	GO:0097354	prenylation	IEP	Predicted GO
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	Predicted GO
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	37	88

External Links

No external refs found!

Solyc01g096860

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation