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  5. MA_6175g0020

MA_6175g0020


Description : (at1g54180 : 285.0) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.; BREVIS RADIX-like 3 (BRX-LIKE3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591); BEST Arabidopsis thaliana protein match is: DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein (TAIR:AT3G14000.2); Has 729 Blast hits to 418 proteins in 28 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 726; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description)


Gene families : OG_42_0000856 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000856_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_6175g0020
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Bradi3g52537 No alias DZC (Disease resistance/zinc finger/chromosome... 0.03 Orthogroups_2024-Update
Glyma.07G036500 No alias DZC (Disease resistance/zinc finger/chromosome... 0.04 Orthogroups_2024-Update
LOC_Os09g27230 No alias brevis radix, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G170800 No alias DZC (Disease resistance/zinc finger/chromosome... 0.03 Orthogroups_2024-Update
Potri.003G101500 No alias DZC (Disease resistance/zinc finger/chromosome... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 382 436
IPR013591 Brevis_radix_dom 217 271
IPR027988 BRX_N 77 109
No external refs found!