Description : (at4g02750 : 542.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 978.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_6329g0010 | |
Cluster | HCCA clusters: Cluster_47 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g03580 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | Orthogroups_2024-Update | |
Bradi2g25480 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G080660.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
PSME_00010401-RA | No alias | (at4g18750 : 645.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
Potri.001G066100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.001G258500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.002G239600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.003G031600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.004G124400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.005G005700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.015G018700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.017G137200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.018G040100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.T137000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.1G311600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.2G031700.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Seita.2G203900.1 | No alias | RNA editing factor *(OTP87) | 0.03 | Orthogroups_2024-Update | |
Seita.4G225800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.7G205600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.9G355700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.9G477500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.001G347100.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.002G384800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.003G237100.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.010G066900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.010G232700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc01g081020 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
Sopen01g015270 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update | |
Sopen01g033110 | No alias | PPR repeat | 0.06 | Orthogroups_2024-Update | |
Sopen01g038950 | No alias | PPR repeat | 0.06 | Orthogroups_2024-Update | |
Sopen02g025050 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen02g039140 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen07g022420 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen11g001910 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen11g002630 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen11g024970 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005956 | protein kinase CK2 complex | IEP | Predicted GO |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015693 | magnesium ion transport | IEP | Predicted GO |
MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
BP | GO:0070838 | divalent metal ion transport | IEP | Predicted GO |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 133 | 181 |
IPR002885 | Pentatricopeptide_repeat | 397 | 444 |
IPR002885 | Pentatricopeptide_repeat | 296 | 342 |
IPR002885 | Pentatricopeptide_repeat | 471 | 496 |
IPR002885 | Pentatricopeptide_repeat | 208 | 234 |
IPR002885 | Pentatricopeptide_repeat | 236 | 266 |
IPR032867 | DYW_dom | 571 | 694 |
No external refs found! |