MA_635039g0010


Description : (at1g02520 : 559.0) P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 344.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1118.0) & (original description: no original description)


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_635039g0010
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Bradi2g47400 No alias ATP binding cassette subfamily B4 0.02 Orthogroups_2024-Update
Glyma.17G259100 No alias P-glycoprotein 13 0.03 Orthogroups_2024-Update
HORVU1Hr1G017460.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Mp7g16060.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
PSME_00004142-RA No alias (q6yuu5|mdr_orysa : 1178.0) Putative multidrug... 0.02 Orthogroups_2024-Update
Potri.001G139600 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Potri.018G087100 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Potri.018G141300 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Seita.5G282700.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.004G073300.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sopen06g004030 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 210 358
IPR011527 ABC1_TM_dom 2 130
No external refs found!