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  5. MA_6712793g0010

MA_6712793g0010


Description : (at1g02420 : 82.4) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G61360.1); Has 33079 Blast hits to 11325 proteins in 263 species: Archae - 4; Bacteria - 36; Metazoa - 353; Fungi - 350; Plants - 31222; Viruses - 0; Other Eukaryotes - 1114 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description)


Gene families : OG_42_0000934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_6712793g0010
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
PSME_00021412-RA No alias (at3g62470 : 474.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004797 thymidine kinase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 158 174
IPR002885 Pentatricopeptide_repeat 85 112
IPR002885 Pentatricopeptide_repeat 18 56
No external refs found!