1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_67616g0010

MA_67616g0010


Description : (at1g01350 : 342.0) Zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein (TAIR:AT5G06420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 684.0) & (original description: no original description)


Gene families : OG_42_0006055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006055_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_67616g0010
Cluster HCCA clusters: Cluster_145


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004668 protein-arginine deiminase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009445 putrescine metabolic process IEP Predicted GO
BP GO:0009446 putrescine biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 261 285
IPR000571 Znf_CCCH 188 213
No external refs found!