Description : (at3g06080 : 276.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 (TAIR:AT5G19160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description)
Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_7200g0010 | |
Cluster | HCCA clusters: Cluster_121 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_06264 | No alias | protein trichome birefringence | 0.02 | Orthogroups_2024-Update | |
Brara.C03373.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
MA_10143614g0010 | No alias | (at5g19160 : 331.0) Encodes a member of the TBL... | 0.03 | Orthogroups_2024-Update | |
PSME_00044830-RA | No alias | (at3g12060 : 356.0) Encodes a member of the TBL... | 0.03 | Orthogroups_2024-Update | |
Potri.002G054400 | No alias | Plant protein of unknown function (DUF828) | 0.03 | Orthogroups_2024-Update | |
Pp1s390_21V6 | No alias | af361591_1 at5g06230 mbl20_11 | 0.02 | Orthogroups_2024-Update | |
Sopen05g001120 | No alias | GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006810 | transport | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
No external refs found! |