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  5. MA_733169g0010

MA_733169g0010


Description : (at2g16910 : 90.9) Encodes a basic helix-loop helix transcription factor involved in tapetal cell development. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters.; ABORTED MICROSPORES (AMS); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, sepal, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G26744.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description)


Gene families : OG_42_0000609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_733169g0010
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
A4A49_21428 No alias transcription factor fer-like iron deficiency-induced... 0.02 Orthogroups_2024-Update
Bradi5g07720 No alias FER-like regulator of iron uptake 0.02 Orthogroups_2024-Update
Brara.C02411.1 No alias transcriptional regulator *(FIT) of iron homeostasis &... 0.04 Orthogroups_2024-Update
GRMZM2G042895 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G119823 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G066100.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g23550 No alias basic helix-loop-helix family protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002554-RA No alias (at5g57150 : 99.8) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00014663-RA No alias (at2g16910 : 103.0) Encodes a basic helix-loop helix... 0.04 Orthogroups_2024-Update
PSME_00019813-RA No alias (at5g57150 : 86.7) basic helix-loop-helix (bHLH)... 0.05 Orthogroups_2024-Update
Potri.018G141800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s182_7V6 No alias bhlh transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G051800.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 67 109
No external refs found!