Description : (at1g65690 : 184.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 25 (TAIR:AT5G36970.1); Has 985 Blast hits to 984 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description)
Gene families : OG_42_0000666 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000666_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_740280g0010 | |
Cluster | HCCA clusters: Cluster_129 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g27080 | No alias | NDR1/HIN1-like protein 13... | 0.03 | Orthogroups_2024-Update | |
Glyma.18G047800 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g29260 | No alias | expressed protein | 0.02 | Orthogroups_2024-Update | |
LOC_Os08g23460 | No alias | harpin-induced protein 1 domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os12g03370 | No alias | harpin-induced protein 1 domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.012G145500 | No alias | NDR1/HIN1-like 25 | 0.04 | Orthogroups_2024-Update | |
Sopen07g028180 | No alias | Late embryogenesis abundant protein | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
MF | GO:0003896 | DNA primase activity | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
CC | GO:0005664 | nuclear origin of replication recognition complex | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predicted GO |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097747 | RNA polymerase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004864 | LEA_2 | 143 | 242 |
No external refs found! |