MA_740280g0010


Description : (at1g65690 : 184.0) Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: NDR1/HIN1-like 25 (TAIR:AT5G36970.1); Has 985 Blast hits to 984 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 985; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description)


Gene families : OG_42_0000666 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_740280g0010
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
At2g27080 No alias NDR1/HIN1-like protein 13... 0.03 Orthogroups_2024-Update
Glyma.18G047800 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
LOC_Os04g29260 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os08g23460 No alias harpin-induced protein 1 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g03370 No alias harpin-induced protein 1 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.012G145500 No alias NDR1/HIN1-like 25 0.04 Orthogroups_2024-Update
Sopen07g028180 No alias Late embryogenesis abundant protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 143 242
No external refs found!