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  5. MA_7604366g0010

MA_7604366g0010


Description : (at1g80110 : 163.0) phloem protein 2-B11 (PP2-B11); FUNCTIONS IN: carbohydrate binding; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B12 (TAIR:AT5G24560.1); Has 567 Blast hits to 552 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_7604366g0010
Cluster HCCA clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
At2g02300 No alias F-box protein PP2-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR1] 0.02 Orthogroups_2024-Update
At2g02350 No alias F-box protein SKIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FV02] 0.02 Orthogroups_2024-Update
At5g45090 No alias Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7... 0.02 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.02 Orthogroups_2024-Update
Brara.F03422.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G233900 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
Glyma.20G021500 No alias phloem protein 2-A1 0.03 Orthogroups_2024-Update
HORVU6Hr1G089430.2 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00005204-RA No alias (at2g02240 : 157.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
PSME_00020144-RA No alias (at2g02340 : 131.0) phloem protein 2-B8 (PP2-B8);... 0.03 Orthogroups_2024-Update
PSME_00025236-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00050854-RA No alias (at2g02240 : 154.0) maternal effect embryo arrest 66... 0.05 Orthogroups_2024-Update
Potri.018G015900 No alias phloem protein 2-B12 0.02 Orthogroups_2024-Update
Seita.7G060500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G231200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G340700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 68 111
IPR025886 PP2-like 162 317
No external refs found!