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  5. MA_774352g0010

MA_774352g0010


Description : (at4g26680 : 426.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2). & (q76c99|rf1_orysa : 156.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 852.0) & (original description: no original description)


Gene families : OG_42_0002181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_774352g0010
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
MA_13032g0010 No alias (at5g40400 : 383.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
MA_64750g0010 No alias (at1g19290 : 527.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_69436g0010 No alias (at5g61400 : 432.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00002405-RA No alias (at1g19290 : 601.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00008668-RA No alias (at4g26680 : 452.0) Tetratricopeptide repeat (TPR)-like... 0.08 Orthogroups_2024-Update
Solyc02g021280 No alias No description available 0.02 Orthogroups_2024-Update
Sopen02g005740 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen07g024110 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 253 286
IPR002885 Pentatricopeptide_repeat 293 339
IPR002885 Pentatricopeptide_repeat 363 411
IPR002885 Pentatricopeptide_repeat 432 481
No external refs found!