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  5. MA_84752g0010

MA_84752g0010


Description : (at2g40470 : 201.0) LOB domain-containing protein 15 (LBD15); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 13 (TAIR:AT2G30340.1); Has 1010 Blast hits to 1005 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 1006; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_84752g0010
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_03191 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
A4A49_10474 No alias lob domain-containing protein 25 0.02 Orthogroups_2024-Update
A4A49_25203 No alias lob domain-containing protein 11 0.02 Orthogroups_2024-Update
At1g16530 No alias LOB domain-containing protein 3... 0.03 Orthogroups_2024-Update
Bradi4g28883 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Brara.I00295.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I05333.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
MA_10429262g0010 No alias (at5g63090 : 192.0) Involved in lateral organ... 0.04 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
Mp5g11460.1 No alias transcription factor (AS2/LOB) 0.02 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.06 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
Potri.010G177100 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Seita.3G240500.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G119400.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen11g004610 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 83 180
No external refs found!