1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_8950g0010

MA_8950g0010


Description : (at5g23730 : 288.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G52250.1); Has 12290 Blast hits to 8463 proteins in 487 species: Archae - 16; Bacteria - 2654; Metazoa - 3890; Fungi - 2899; Plants - 1307; Viruses - 0; Other Eukaryotes - 1524 (source: NCBI BLink). & (p93471|cop1_pea : 170.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 576.0) & (original description: no original description)


Gene families : OG_42_0006779 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006779_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_8950g0010

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G389155 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Sopen11g001190 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 173 205
No external refs found!