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  5. MA_9015982g0010

MA_9015982g0010


Description : (p13362|act1_orysa : 582.0) Actin-1 - Oryza sativa (Rice) & (at3g12110 : 578.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (reliability: 1156.0) & (original description: no original description)


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9015982g0010
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
At3g46520 No alias Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497] 0.04 Orthogroups_2024-Update
Glyma.13G335600 No alias actin-11 0.04 Orthogroups_2024-Update
Glyma.19G000900 No alias actin-11 0.04 Orthogroups_2024-Update
MA_96086g0010 No alias (at5g09810 : 707.0) Member of Actin gene family.Mutants... 0.03 Orthogroups_2024-Update
PSME_00011257-RA No alias (o81221|act_goshi : 616.0) Actin - Gossypium hirsutum... 0.04 Orthogroups_2024-Update
PSME_00045427-RA No alias (o81221|act_goshi : 556.0) Actin - Gossypium hirsutum... 0.04 Orthogroups_2024-Update
PSME_00049737-RA No alias (at5g09810 : 680.0) Member of Actin gene family.Mutants... 0.03 Orthogroups_2024-Update
Seita.3G227300.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Solyc10g080500 No alias actin 0.06 Orthogroups_2024-Update
Sopen03g021220 No alias Actin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 376
No external refs found!