Description : (at1g24290 : 300.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), ATPase, AAA-type, core (InterPro:IPR003959), MgsA AAA+ ATPase C-terminal (InterPro:IPR021886), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: replication factor C subunit 3 (TAIR:AT1G77470.1); Has 22422 Blast hits to 22383 proteins in 2992 species: Archae - 614; Bacteria - 15728; Metazoa - 553; Fungi - 700; Plants - 273; Viruses - 62; Other Eukaryotes - 4492 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description)
Gene families : OG_42_0009429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009429_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_90280g0010 | |
Cluster | HCCA clusters: Cluster_107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PSME_00014066-RA | No alias | (at1g24290 : 299.0) AAA-type ATPase family protein;... | 0.08 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
No external refs found! |