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  5. MA_9084440g0010

MA_9084440g0010


Description : (at1g77405 : 265.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 29650 Blast hits to 9898 proteins in 260 species: Archae - 4; Bacteria - 20; Metazoa - 223; Fungi - 306; Plants - 28152; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)


Gene families : OG_42_0007353 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007353_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9084440g0010
Cluster HCCA clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Sobic.001G099200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 262 313
IPR002885 Pentatricopeptide_repeat 231 258
IPR002885 Pentatricopeptide_repeat 325 343
No external refs found!