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  5. MA_93117g0010

MA_93117g0010


Description : "(at4g18390 : 115.0) ""TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2"" (TCP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (TAIR:AT1G30210.2); Has 2182 Blast hits to 1888 proteins in 369 species: Archae - 0; Bacteria - 6; Metazoa - 128; Fungi - 15; Plants - 1699; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)"


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_93117g0010
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Brara.C00326.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02582.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Seita.1G230500.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g033790 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 30 170
No external refs found!