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  5. Solyc10g086580

Solyc10g086580


Description : Ribulose bisphosphate carboxylase/oxygenase activase (AHRD V3.3 *** V9IMY5_NICAT)


Gene families : OG_42_0002704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g086580
Cluster HCCA clusters: ref="/species/">SpecSpecies/li> Cluster_65

Target Alias Description ECC score Gene Family Method Actions
268623 No alias rubisco activase 0.05 Orthogroups_2024-Update
Bradi4g09125 No alias rubisco activase 0.03 Orthogroups_2024-Update
Brara.C02027.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Brara.E00605.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Cre04.g229300 No alias rubisco activase 0.03 Orthogroups_2024-Update
Glyma.02G249600 No alias rubisco activase 0.08 Orthogroups_2024-Update
Glyma.03G068100 No alias rubisco activase 0.03 Orthogroups_2024-Update
Glyma.11G221000 No alias rubisco activase 0.04 Orthogroups_2024-Update
Glyma.14G067000 No alias rubisco activase 0.05 Orthogroups_2024-Update
Glyma.18G036400 No alias rubisco activase 0.08 Orthogroups_2024-Update
HORVU4Hr1G027260.8 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Kfl00238_0010 kfl00238_0010_v1.1 (at2g39730 : 589.0) Rubisco activase, a nuclear-encoded... 0.02 Orthogroups_2024-Update
LOC_Os11g47970 No alias AAA-type ATPase family protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g03990.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Pp1s199_130V6 No alias ribulose bisphosphate carboxylase oxygenase chloroplast expressed 0.03 Orthogroups_2024-Update
Pp1s258_44V6 No alias ribulose bisphosphate carboxylase oxygenase activase chloroplast 0.05 Orthogroups_2024-Update
Pp1s5_83V6 No alias ribulose bisphosphate carboxylase oxygenase activase chloroplast 0.06 Orthogroups_2024-Update
Sobic.005G231500.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Sopen10g035980 No alias ATPase family associated with various cellular activities (AAA) 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 162 303
No external refs found!