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  5. MA_93221g0010

MA_93221g0010


Description : (at1g70210 : 231.0) Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_93221g0010
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
A4A49_04871 No alias cyclin-d3-2 0.02 Orthogroups_2024-Update
At5g67260 No alias CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260] 0.04 Orthogroups_2024-Update
Bradi4g29467 No alias CYCLIN D1;1 0.04 Orthogroups_2024-Update
Brara.I00217.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Cre09.g414416 No alias Cyclin family protein 0.02 Orthogroups_2024-Update
GRMZM2G007130 No alias cyclin d5;1 0.03 Orthogroups_2024-Update
GRMZM2G047637 No alias CYCLIN D1;1 0.02 Orthogroups_2024-Update
GRMZM2G140633 No alias CYCLIN D4;1 0.02 Orthogroups_2024-Update
GRMZM2G476685 No alias CYCLIN D1;1 0.04 Orthogroups_2024-Update
Glyma.05G106800 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Glyma.06G198800 No alias CYCLIN D7;1 0.03 Orthogroups_2024-Update
Glyma.08G280600 No alias CYCLIN D4;1 0.02 Orthogroups_2024-Update
Glyma.10G256200 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Glyma.12G199300 No alias Cyclin D6;1 0.02 Orthogroups_2024-Update
Glyma.13G247600 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
HORVU5Hr1G059770.3 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
HORVU7Hr1G033350.3 No alias regulatory protein *(CYCD) of cell cycle 0.04 Orthogroups_2024-Update
LOC_Os09g21450 No alias cyclin, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g24670.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00019595-RA No alias (at1g76310 : 144.0) core cell cycle genes; CYCLIN B2;4... 0.03 Orthogroups_2024-Update
Potri.004G032100 No alias Cyclin D6;1 0.05 Orthogroups_2024-Update
Potri.008G146600 No alias CYCLIN D1;1 0.04 Orthogroups_2024-Update
Potri.019G118600 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Seita.4G087700.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Seita.6G185800.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 190 297
IPR006671 Cyclin_N 58 187
No external refs found!