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  5. MA_93384g0010

MA_93384g0010


Description : (at4g02480 : 1067.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (p54774|cdc48_soybn : 171.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2134.0) & (original description: no original description)


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_93384g0010
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
166381 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
At1g02890 No alias AAA-type ATPase family protein... 0.05 Orthogroups_2024-Update
At3g19740 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Bradi1g18160 No alias AAA-type ATPase family protein 0.05 Orthogroups_2024-Update
Bradi1g62731 No alias AAA-type ATPase family protein 0.04 Orthogroups_2024-Update
Bradi4g10700 No alias AAA-type ATPase family protein 0.05 Orthogroups_2024-Update
Brara.J00140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G157621 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
GRMZM2G379964 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Glyma.02G155000 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
Glyma.02G155100 No alias AAA-type ATPase family protein 0.04 Orthogroups_2024-Update
Glyma.05G047400 No alias AAA-type ATPase family protein 0.05 Orthogroups_2024-Update
Glyma.09G127000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
Glyma.10G019300 No alias AAA-type ATPase family protein 0.04 Orthogroups_2024-Update
Glyma.17G129200 No alias AAA-type ATPase family protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G033300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G075440.6 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00055_0110 kfl00055_0110_v1.1 (at4g02480 : 607.0) AAA-type ATPase family protein;... 0.03 Orthogroups_2024-Update
LOC_Os03g22420 No alias AAA-type ATPase family protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp5g19800.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
PSME_00006163-RA No alias (at4g02480 : 1157.0) AAA-type ATPase family protein;... 0.03 Orthogroups_2024-Update
Seita.9G407500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G207500.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 813 942
No external refs found!