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  5. Solyc10g086750

Solyc10g086750


Description : LOW QUALITY:DNA double-strand break repair rad50 ATPase, putative isoform 2 (AHRD V3.3 *-* A0A061EQL2_THECC)


Gene families : OG_42_0004348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g086750
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
At3g54060 No alias Myosin-M heavy protein [Source:UniProtKB/TrEMBL;Acc:Q9M397] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!