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  5. Solyc11g005160

Solyc11g005160


Description : F-box family protein (AHRD V3.3 *** B9MX84_POPTR)


Gene families : OG_42_0001925 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001925_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g005160
Cluster HCCA clusters: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
A4A49_24961 No alias f-box protein skip23 0.03 Orthogroups_2024-Update
Brara.F02625.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g083170 No alias F-box protein (AHRD V3.3 *** G7LA96_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 284 335
No external refs found!