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Description : (at5g55840 : 380.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 354.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 760.0) & (original description: no original description)
Gene families : OG_42_0020912 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_9542585g0010 | |
| Cluster | HCCA clusters: Cluster_46 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 133 | 164 |
| IPR002885 | Pentatricopeptide_repeat | 584 | 615 |
| IPR002885 | Pentatricopeptide_repeat | 341 | 369 |
| IPR002885 | Pentatricopeptide_repeat | 167 | 198 |
| IPR002885 | Pentatricopeptide_repeat | 271 | 320 |
| IPR002885 | Pentatricopeptide_repeat | 622 | 670 |
| IPR002885 | Pentatricopeptide_repeat | 376 | 425 |
| IPR002885 | Pentatricopeptide_repeat | 516 | 565 |
| IPR002885 | Pentatricopeptide_repeat | 205 | 254 |
| IPR002885 | Pentatricopeptide_repeat | 447 | 495 |
| No external refs found! |