Description : (at5g59970 : 130.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 130.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 260.0) & (original description: no original description)
Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_97185g0020 | |
Cluster | HCCA clusters: Cluster_230 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AC212565.3_FG001 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi1g05996 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
GRMZM2G149178 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.12G074500 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G064300 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G071210.4 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G071760.3 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G073680.1 | No alias | histone *(H4) | 0.02 | Orthogroups_2024-Update | |
HORVU2Hr1G098320.1 | No alias | histone *(H4) | 0.03 | Orthogroups_2024-Update | |
MA_73436g0010 | No alias | (at5g59970 : 102.0) Histone superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_97951g0010 | No alias | (at5g59970 : 160.0) Histone superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
Potri.006G168100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Pp1s378_30V6 | No alias | histone h4 | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0004451 | isocitrate lyase activity | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016833 | oxo-acid-lyase activity | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR035425 | CENP-T/H4_C | 21 | 87 |
No external refs found! |