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  5. MA_97185g0020

MA_97185g0020


Description : (at5g59970 : 130.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 130.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 260.0) & (original description: no original description)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_97185g0020
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AC212565.3_FG001 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g05996 No alias Function unknown 0.03 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G071210.4 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G071760.3 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G073680.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU2Hr1G098320.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
MA_73436g0010 No alias (at5g59970 : 102.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Potri.006G168100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Pp1s378_30V6 No alias histone h4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 21 87
No external refs found!