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  5. MA_9741g0010

MA_9741g0010


Description : (at4g02750 : 585.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1164.0) & (original description: no original description)


Gene families : OG_42_0012256 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012256_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9741g0010
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
PSME_00015914-RA No alias (at2g22070 : 581.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 616 740
IPR002885 Pentatricopeptide_repeat 342 389
IPR002885 Pentatricopeptide_repeat 210 258
IPR002885 Pentatricopeptide_repeat 443 490
IPR002885 Pentatricopeptide_repeat 518 541
IPR002885 Pentatricopeptide_repeat 86 103
IPR002885 Pentatricopeptide_repeat 583 612
IPR002885 Pentatricopeptide_repeat 417 442
IPR002885 Pentatricopeptide_repeat 178 207
IPR002885 Pentatricopeptide_repeat 310 339
No external refs found!