Solyc11g006030

Description : U-box domain-containing family protein (AHRD V3.3 *** U5FLQ4_POPTR)

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc11g006030
Cluster	HCCA clusters: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
At1g49780	No alias	U-box domain-containing protein 26...	0.03	Orthogroups_2024-Update
Brara.E02898.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
GRMZM2G071484	No alias	plant U-box 22	0.03	Orthogroups_2024-Update
GRMZM2G169690	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Glyma.05G189600	No alias	CYS, MET, PRO, and GLY protein 2	0.03	Orthogroups_2024-Update
Glyma.14G212200	No alias	CYS, MET, PRO, and GLY protein 1	0.04	Orthogroups_2024-Update
Kfl00108_0050	kfl00108_0050_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
LOC_Os03g13740	No alias	immediate-early fungal elicitor protein CMPG1, putative,...	0.03	Orthogroups_2024-Update
Potri.001G216300	No alias	plant U-box 24	0.03	Orthogroups_2024-Update
Seita.7G095100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G169200.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Sobic.004G169900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.010G102000.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Solyc01g009320	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen11g001660	No alias	U-box domain	0.03	Orthogroups_2024-Update
Sopen11g027630	No alias	U-box domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004602	glutathione peroxidase activity	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0019829	cation-transporting ATPase activity	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
CC	GO:0034357	photosynthetic membrane	IEP	Predicted GO
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0042651	thylakoid membrane	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predicted GO
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	22	94

External Links

No external refs found!

Solyc11g006030

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation