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  5. MA_9896333g0010

MA_9896333g0010


Description : (at1g21450 : 123.0) Encodes a scarecrow-like protein (SCL1). Member of GRAS gene family.; SCARECROW-like 1 (SCL1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G48150.2); Has 2480 Blast hits to 2441 proteins in 303 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2475; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 104.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 246.0) & (original description: no original description)


Gene families : OG_42_0005529 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_9896333g0010
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G242100 No alias SCARECROW-like 1 0.02 Orthogroups_2024-Update
MA_1130033g0010 No alias (at1g21450 : 194.0) Encodes a scarecrow-like protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 2 90
No external refs found!