Pp1s101_95V6

Description : photosystem ii protein

Gene families : OG_42_0005644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005644_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s101_95V6
Cluster	HCCA clusters: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36701	No alias	photosystem ii core complex proteins psby, chloroplastic	0.03	Orthogroups_2024-Update
At1g67740	No alias	Putative uncharacterized protein...	0.04	Orthogroups_2024-Update
Bradi3g13970	No alias	photosystem II BY	0.02	Orthogroups_2024-Update
Brara.G02733.1	No alias	component *(PsbY) of PS-II complex	0.06	Orthogroups_2024-Update
Cre10.g452100	No alias	photosystem II BY	0.05	Orthogroups_2024-Update
Glyma.05G172300	No alias	photosystem II BY	0.07	Orthogroups_2024-Update
Glyma.11G245400	No alias	photosystem II BY	0.04	Orthogroups_2024-Update
Kfl00370_0100	kfl00370_0100_v1.1	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_12201g0010	No alias	(at1g67740 : 114.0) PsbY precursor (psbY) mRNA. This...	0.04	Orthogroups_2024-Update
Mp8g12730.1	No alias	component PsbY of PS-II complex	0.04	Orthogroups_2024-Update
Pp1s221_76V6	No alias	photosystem ii protein	0.04	Orthogroups_2024-Update
Seita.6G082000.1	No alias	component *(PsbY) of PS-II complex	0.03	Orthogroups_2024-Update
Sobic.007G023300.1	No alias	component *(PsbY) of PS-II complex	0.02	Orthogroups_2024-Update
Solyc10g077120	No alias	Photosystem II core complex proteins psbY (AHRD V3.3 ***...	0.05	Orthogroups_2024-Update
Sopen10g028800	No alias	Photosystem II protein Y (PsbY)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0030145	manganese ion binding	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
MF	GO:0008565	protein transporter activity	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
BP	GO:0010109	regulation of photosynthesis	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0010242	oxygen evolving activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
CC	GO:0034357	photosynthetic membrane	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Predicted GO
BP	GO:0042549	photosystem II stabilization	IEP	Predicted GO
CC	GO:0042651	thylakoid membrane	IEP	Predicted GO
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Predicted GO
BP	GO:0051186	cofactor metabolic process	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR009388	PSII_PsbY	161	193
IPR009388	PSII_PsbY	238	270
IPR009388	PSII_PsbY	93	125
IPR009388	PSII_PsbY	321	353

External Links

No external refs found!

Pp1s101_95V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation