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  5. Pp1s102_133V6

Pp1s102_133V6


Description : 60s ribosomal protein


Gene families : OG_42_0001366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s102_133V6
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bradi1g46840 No alias Ribosomal protein L35Ae family protein 0.06 Orthogroups_2024-Update
Bradi4g16690 No alias Ribosomal protein L35Ae family protein 0.06 Orthogroups_2024-Update
Brara.B02119.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.D00376.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.G03191.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.I03824.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre10.g459250 No alias Ribosomal protein L35Ae family protein 0.06 Orthogroups_2024-Update
GRMZM5G890561 No alias Ribosomal protein L35Ae family protein 0.04 Orthogroups_2024-Update
Glyma.08G087000 No alias Ribosomal protein L35Ae family protein 0.05 Orthogroups_2024-Update
HORVU6Hr1G083120.2 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
HORVU7Hr1G031850.4 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00148_0220 kfl00148_0220_v1.1 (at3g55750 : 81.6) Ribosomal protein L35Ae family... 0.02 Orthogroups_2024-Update
Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.04 Orthogroups_2024-Update
PSME_00007301-RA No alias (at1g74270 : 157.0) Ribosomal protein L35Ae family... 0.05 Orthogroups_2024-Update
PSME_00044476-RA No alias (at1g74270 : 189.0) Ribosomal protein L35Ae family... 0.03 Orthogroups_2024-Update
Pp1s1_549V6 No alias 60s ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s2_655V6 No alias 60s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s52_116V6 No alias 60s ribosomal protein 0.07 Orthogroups_2024-Update
Seita.1G344200.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.4G043000.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.002G179300.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.010G070500.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Solyc03g096360 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.04 Orthogroups_2024-Update
Solyc05g052810 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.03 Orthogroups_2024-Update
Sopen03g026480 No alias Ribosomal protein L35Ae 0.05 Orthogroups_2024-Update
Sopen05g031310 No alias Ribosomal protein L35Ae 0.03 Orthogroups_2024-Update
evm.model.contig_2130.2 No alias (at1g74270 : 120.0) Ribosomal protein L35Ae family... 0.08 Orthogroups_2024-Update
evm.model.tig00020723.23 No alias (at3g55750 : 148.0) Ribosomal protein L35Ae family... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 11 105
No external refs found!