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  5. Solyc11g006650

Solyc11g006650


Description : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein, putative (AHRD V3.3 *** A0A061FQV4_THECC)


Gene families : OG_42_0000981 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000981_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g006650
Cluster HCCA clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G101300 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Orthogroups_2024-Update
Glyma.20G193900 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Orthogroups_2024-Update
Potri.016G071800 No alias Double Clp-N motif-containing P-loop nucleoside... 0.02 Orthogroups_2024-Update
Sopen01g003250 No alias Clp amino terminal domain 0.03 Orthogroups_2024-Update
Sopen07g006950 No alias Clp amino terminal domain 0.06 Orthogroups_2024-Update
Sopen10g032510 No alias Clp amino terminal domain 0.02 Orthogroups_2024-Update
Sopen11g002580 No alias Clp amino terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0019538 protein metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004176 Clp_N 23 54
IPR004176 Clp_N 130 167
No external refs found!